Genetic Confidence

Confidence in every strain

Strengthen reproducibility and reduce risk with monitoring designed for genetic precision.

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Background control 
Confirm strain purity across cohorts.
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Speed congenics
Select breeders strategically to shorten backcrossing.
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Cost-effective QC
High-resolution SNP testing at low cost.
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Seamless integration 
Add monitoring directly from your QuickOrder dashboard.

10,000+ SNPs tested across 200+ inbred strains.

Value Propositions

Ensure reproducible results

Confident discovery starts with genetic certainty. Genetic Monitoring is available on every genotyping sample, making it easy to verify genetic background whenever your research demands it.

Reduce hidden genetic risk

Uncontrolled genetic variation can quietly compromise your data. Ongoing monitoring helps you detect deviations early and maintain confidence in your colony’s genetic integrity.

Support reliable, published data

Standardized genetic verification strengthens transparency and reproducibility. As expectations increase across the scientific community, confirming strain and substrain backgrounds helps safeguard data quality and credibility.

High-resolution genetic insight

Powered by MiniMUGA, a research-developed array with over 10,000 SNP markers. This proven platform enables precise determination of genetic background across 241 inbred mouse strains.

How it Works

Streamlined monitoring

1
Select samples

Choose directly from existing genotyping orders. No new sampling required.

2
Run MiniMUGA

Analyze ~10,000+ SNPs across autosomes, sex chromosomes, and diagnostic loci. 

3
Review reports

Get allele calls, background mix, and strain/sub-strain detection.

4
Act with confidence

Use the data to guide breeding, confirm congenic lines, and refine study design.

Key Features

High-resolution data. Clear, actionable insights.

MiniMUGA SNP panel 

~10,000+ markers across 200+ strains, including sex, sub-strains, and constructs.

No new samples 

Uses stored samples from genotyping runs.

Speed congenics model 

Reach congenic lines in as few as 5 generations.

Contamination detection 

Identify background shifts before they derail studies.

Exportable reports 

Clear tables, ideograms, and summaries for records or publications.

Scalable for any study size

Easily expand monitoring across cohorts, strains, or facilities without added complexity.

Trusted By Many

Proven by data. Trusted by scientists.

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Validated in 50,000+ samples across diverse genetic backgrounds.
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Enhanced pipelines for marker annotation, deeper consensus calls, and anomaly detection.
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Referenced in peer-reviewed studies as critical for rigor and reproducibility.

PubMed

Published papers

Cancer Models

Colorectal hyperplasia and inflammation in keratin 8-deficient FVB/N mice

Baribault et al., 1994 (GI tract)

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Cancer Models

Genetic background controls tumor development in PTEN-deficient mice

Freeman et al. 2006 (prostate)

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Cancer Models

Mouse models of cancer: does the strain matter?

Hunter KW 2012 (cancer review)

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Cancer Models

Effects of genetic background on tumorigenesis in p53-deficient mice

Donehower et al., 1995 (lymphoma)

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Cancer Models

Effects of FVB/NJ and C57Bl/6J strain backgrounds on mammary tumor phenotype in inducible nitric oxide synthase deficient mice

Davie et al., 2017 (mammary)

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Cancer Models

Germline genetic variation modulates tumor progression and metastasis in a mouse model of neuroendocrine prostate carcinoma

Patel et al., 2016 (prostate)

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Cancer Models

A resistant genetic background leading to incomplete penetrance of intestinal neoplasia and reduced loss of heterozygosity in ApcMin/+ mice

Shoemaker et al., 1998 (GI tract)

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Cancer Models

Dissociation of epithelial and neuroendocrine carcinoma lineages in the transgenic adenocarcinoma of mouse prostate model of prostate cancer

Chiaverotti et al., 2008 (prostate)

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Cancer Models

Immune status, strain background, and anatomic site of inoculation affect mouse papillomavirus (MmuPV1) induction of exophytic papillomas or endophytic trichoblastomas

Sundberg et al., 2014 (papilomas)

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Other Supporting Evidence

Read up on supporting evidence

White paper

Importance of Monitoring Genetic Background on Genetically Modified Mouse Colonies

White paper

Speed Congenics - Efficiency, Economy, Stability, Consistency, and Transparency

Webinar

Dr. Fernando Benavides, DVM, PhD, DACLAM (Video)

Try it Today

Strengthen every study with Genetic Monitoring

Add Genetic Monitoring to your genotyping order — no new sample required.

Confirm your strain
Genetic Monitoring | Transnetyx